Semantic search

This page or action requires JavaScript to work, please enable JavaScript in your browser or use a browser where this is supported so that functionality can be served and is provided as requested. For further assistance, please have a look at the noscript help page.

Options | Search Clear all entries |

Condition

Printout selection

Options

Parameters [+]

limit:

The maximum number of results to return

offset:

The offset of the first result

link:

Show values as links

headers:

Display the headers/property names

mainlabel:

The label to give to the main page name

intro:

The text to display before the query results, if there are any

outro:

The text to display after the query results, if there are any

searchlabel:

Text for continuing the search

default:

The text to display if there are no query results

class:

An additional CSS class to set for the table

transpose:

Display table headers vertically and results horizontally

sep:

The separator between results

Sort options

Delete

Add sorting condition

ResultCodeDebugExtra

To embed this query inline into a wiki page use the code below.

{{#ask: [[Category:Publications]] [[Coupling states::ET]]
 |?Was published in year=Year
 |?Has title=Reference
 |?Coupling states=Coupling
 |?Pathways=Pathway
 |?Preparation
 |?Mammal and model=Organism
 |?Tissue and cell=Tissue;cell
 |format=broadtable
 |limit=50
 |offset=480
 |sort=
 |order=asc
 |mainlabel=
}}

Results 481 – 530 previous 50 20 50 100 250 500 next 50

JSON CSV RSS RDF

Query log

{
    "query_string": "[[Category:Publications]] [[Coupling states::ET]]",
    "query_source": "SMWSQLStore",
    "query_time": "0.2638",
    "from_cache": false
}

	Year	Reference	Coupling	Pathway	Preparation	Organism	Tissue;cell
Dias 2016 Neurobiol Aging	2016	Dias C, Lourenço CF, Ferreiro E, Barbosa RM, Laranjinha J, Ledo A (2016) Age-dependent changes in the glutamate-nitric oxide pathway in the hippocampus of the triple transgenic model of Alzheimer's disease: implications for neurometabolic regulation. Neurobiol Aging 46:84-95.	LEAK ET	N S ROX	Permeabilized tissue	Mouse	Nervous system
Dias 2018 Anal Biochem	2018	Dias C, Lourenco CF, Barbosa RM, Laranjinha J, Ledo A (2018) Analysis of respiratory capacity in brain tissue preparations: high-resolution respirometry for intact hippocampal slices. Anal Biochem 551:43-50.	LEAK ROUTINE ET	ROX	Intact cells	Mouse Rat	Nervous system
Dias 2022 Free Radic Biol Med	2022	Dias C, Lourenço CF, Laranjinha J, Ledo A (2022) Modulation of oxidative neurometabolism in ischemia/reperfusion by nitrite. https://doi.org/10.1016/j.freeradbiomed.2022.11.021	ROUTINE OXPHOS ET	N S ROX	Permeabilized tissue Intact cells	Rat	Nervous system
Diaz 2023 Front Mol Biosci	2023	Diaz EC, Adams SH, Weber JL, Cotter M, Børsheim E (2023) Elevated LDL-C, high blood pressure, and low peak V˙O2 associate with platelet mitochondria function in children-The Arkansas Active Kids Study. Front Mol Biosci 10:1136975. https://doi.org/10.3389/fmolb.2023.1136975	LEAK ROUTINE ET	N S	Permeabilized cells	Human	Blood cells Platelet
Dickinson 2013 Cell Death Differ	2013	Dickinson A, Yeung KY, Donoghue J, Baker MJ, Kelly RDW, McKenzie M, Johns TG, St. John JC (2013) The regulation of mitochondrial DNA copy number in glioblastoma cells. Cell Death Differ 20:1644–53.	LEAK ROUTINE ET	ROX		Human	Nervous system Other cell lines
Dickinson 2013 Thesis University of Warwick - Great Britain	2013	Dickinson A (2013) The role of mitochondrial DNA in tumorigenesis. Thesis University of Warwick - Great Britain 292pp.	LEAK ROUTINE ET	ROX	Intact cells	Human	Other cell lines
Dieter 2022 Int J Mol Sci	2022	Dieter F, Esselun C, Eckert GP (2022) Redox active α-lipoic acid differentially improves mitochondrial dysfunction in a cellular model of Alzheimer and its control cells. https://doi.org/10.3390/ijms23169186	LEAK OXPHOS ET	N S CIV NS ROX	Permeabilized cells	Human	Neuroblastoma
Dikov 2010 Exp Gerontol	2010	Dikov D, Aulbach A, Muster B, Dröse S, Jendrach M, Bereiter-Hahn J (2010) Do UCP2 and mild uncoupling improve longevity? Exp Gerontol 45:586-95.	LEAK ROUTINE ET		Intact cells		HeLa Fibroblast HUVEC
Dilberger 2019 Nutrients	2019	Dilberger B, Passon M, Asseburg H, Silaidos CV, Schmitt F, Schmiedl T, Schieber A, Eckert GP (2019) Polyphenols and metabolites enhance survival in rodents and nematodes-impact of mitochondria. Nutrients 11:E1886.	LEAK OXPHOS ET	N S CIV NS	Isolated mitochondria	Caenorhabditis elegans
Dilberger 2019 Oxid Med Cell Longev	2019	Dilberger B, Baumanns S, Schmitt F, Schmiedl T, Hardt M, Wenzel U, Eckert GP (2019) Mitochondrial oxidative stress impairs energy metabolism and reduces stress resistance and longevity of C. elegans. Oxid Med Cell Longev 2019:6840540.	LEAK ROUTINE ET	N S CIV NS	Isolated mitochondria	Caenorhabditis elegans
Distefano 2016 J Gerontol A Biol Sci Med Sci	2016	Distefano G, Standley RA, Dubé JJ, Carnero EA, Ritov VB, Stefanovic-Racic M, Toledo FG, Piva SR, Goodpaster BH, Coen PM (2016) Chronological age does not influence ex-vivo mitochondrial respiration and quality control in skeletal muscle. J Gerontol A Biol Sci Med Sci 72:535-42.	LEAK OXPHOS ET	N S NS	Permeabilized tissue	Human	Skeletal muscle
Distefano 2017 MiPschool Obergurgl		Effects of calorie restriction-induced weight loss and exercise on skeletal muscle mitochondrial energetics of older obese subjects.	LEAK OXPHOS ET	F NS	Permeabilized tissue	Human	Skeletal muscle
Distefano 2018 J Cachexia Sarcopenia Muscle	2018	Distefano G, Standley RA, Zhang X, Carnero EA, Yi F, Cornnell HH, Coen PM (2018) Physical activity unveils the relationship between mitochondrial energetics, muscle quality, and physical function in older adults. J Cachexia Sarcopenia Muscle 9:279-94.	LEAK OXPHOS ET	F N NS	Permeabilized tissue	Human	Skeletal muscle
Divakaruni 2014 Curr Protoc Toxicol	2014	Divakaruni AS, Rogers GW, Murphy AN (2014) Measuring mitochondrial function in permeabilized cells using the Seahorse XF Analyzer or a clark-type oxygen electrode. Curr Protoc Toxicol 60:25.2.1-25.2.16.	LEAK OXPHOS ET	F N S Gp CIV ROX	Permeabilized cells	Mouse	Skeletal muscle Other cell lines
Djafarzadeh 2012 PLoS One	2012	Djafarzadeh S, Vuda M, Takala J, Jakob SM (2012) Effect of remifentanil on mitochondrial oxygen consumption of cultured human hepatocytes. PLoS One 7:e45195.	LEAK OXPHOS ET	N S CIV	Isolated mitochondria	Human	Liver
Djafarzadeh 2017 J Vis Exp	2017	Djafarzadeh S, Jakob SM (2017) High-resolution respirometry to assess mitochondrial function in permeabilized and intact cells. J Vis Exp 8.doi: 10.3791/54985..	OXPHOS ET	N S CIV	Isolated mitochondria
Djeungoue-Petga 2019 Cell Death Dis	2019	Djeungoue-Petga MA, Lurette O, Jean S, Hamel-Côté G, Martín-Jiménez R, Bou M, Cannich A, Roy P, Hebert-Chatelain E (2019) Intramitochondrial Src kinase links mitochondrial dysfunctions and aggressiveness of breast cancer cells. Cell Death Dis 10:940.	LEAK ROUTINE ET		Intact cells	Human	Endothelial;epithelial;mesothelial cell
Djordjevic 2017 Neuroscience	2017	Djordjevic J, Thomson E, Chowdhury SR, Snow WM, Perez C, Wong TP, Fernyhough P, Albensi BC (2017) Brain region- and sex-specific alterations in mitochondrial function and NF-κB signaling in the TgCRND8 mouse model of Alzheimer's disease. Neuroscience 361:81-92.	ROUTINE OXPHOS ET	N S ROX	Isolated mitochondria	Mouse	Nervous system
Dlaskova 2019 Biochim Biophys Acta Bioenerg	2019	Dlasková A, Špaček T, Engstová H, Špačková J, Schröfel A, Holendová B, Smolková K, Plecitá-Hlavatá L, Ježek P (2019) Mitochondrial cristae narrowing upon higher 2-oxoglutarate load. Biochim Biophys Acta Bioenerg 1860:659-78.	LEAK ET	N ROX	Intact cells	Human	Liver
Docherty 2016 Stem Cell Res Ther	2016	Docherty CK, Salt IP, Mercer JR (2016) Lin28A induces energetic switching to glycolytic metabolism in human embryonic kidney cells. Stem Cell Res Ther 7:78.	LEAK ET	ROX	Intact cells	Human	Kidney HEK
Doerrier 2012 Abstract Bioblast		Doerrier C, Garcia JA, Escames G, Acuna-Castroviejo D (2012) Treatment with melatonin prevents myocardial mitochondrial dysfunction in experimental sepsis in mice. Mitochondr Physiol Network 17.12.	LEAK OXPHOS ET	N S NS	Permeabilized tissue	Mouse	Heart
Doerrier 2014 Abstract SECF		Evaluation of melatonin treatment in mitochondria of permeabilized myocardial fibers from septic mice.	LEAK OXPHOS ET	N S NS ROX	Permeabilized tissue Isolated mitochondria	Mouse	Heart
Doerrier 2014 Life Sci	2014	Doerrier C, García JA, Volt H, Díaz-Casado ME, Lima-Cabello E, Ortiz F, Luna-Sánchez M, Escames G, López LC, Acuña-Castroviejo D (2014) Identification of mitochondrial deficits and melatonin targets in liver of septic mice by high-resolution respirometry. Life Sci 121:158-65.	LEAK OXPHOS ET	N S NS	Homogenate Isolated mitochondria	Mouse	Liver
Doerrier 2015 Thesis	2015	Doerrier C (2015) Estudio bioenergetica mitochondrial en la sepsis experimental y efecto protector de la Melatonina. Doctoral Thesis p154.	LEAK OXPHOS ET	N S NS	Permeabilized tissue Isolated mitochondria	Mouse	Heart Liver
Doerrier 2016 Abstract MitoFit Science Camp 2016		Development of a SUIT reference protocol for OXPHOS analysis by high-resolution respirometry.	LEAK ROUTINE OXPHOS ET	F N S Gp CIV NS ROX	Permeabilized cells Permeabilized tissue Homogenate Isolated mitochondria	Human Mouse	Heart Blood cells HEK Platelet
Doerrier 2016 Mitochondrion	2016	Doerrier C, García JA, Volt H, Díaz-Casado ME, Luna-Sánchez M, Fernández-Gil B, Escames G, López LC, Acuña-Castroviejo D (2016) Permeabilized myocardial fibers as model to detect mitochondrial dysfunction during sepsis and melatonin effects without disruption of mitochondrial network. Mitochondrion 27:56-63.	LEAK OXPHOS ET	N S NS ROX	Permeabilized tissue	Mouse	Heart
Doerrier 2016b Abstract Mito Xmas Meeting Innsbruck		Searching for specific targets of ischemic damage of cardiac mitochondria using O2k-Fluorometry.	LEAK OXPHOS ET	F N S Gp CIV ROX	Isolated mitochondria	Mouse	Heart
Doerrier 2017 Abstract MitoEAGLE Barcelona		SUIT reference protocol for comparative mitochondrial physiology.	LEAK ROUTINE OXPHOS ET	F N S Gp CIV	Permeabilized cells Homogenate Isolated mitochondria	Human Mouse	Heart Nervous system HEK
Doerrier 2017 MiP2017 C1		Effects of warm ischemia on cardiac mitochondria to detect specific targets by high-resolution respirometry (HRR)	LEAK ET	F N S CIV NS	Isolated mitochondria	Mouse	Heart
Doerrier 2017 MiP2017 WG2		Upper limit of OXPHOS capacity in permeabilized myofibers: effect of oxygen, ADP and blebbistatin in MiR05Cr and Buffer Z.	LEAK OXPHOS ET	N NS	Permeabilized tissue	Mouse	Skeletal muscle
Doerrier 2017 MiPschool C2		Substrate-uncoupler-inhibitor titration (SUIT) protocols – fundamental principles.	LEAK ROUTINE OXPHOS ET	F N S Gp CIV	Permeabilized cells Homogenate Isolated mitochondria	Human Mouse	Heart Nervous system HEK
Doerrier 2018 EBEC2018		Respiratory mapping of mitochondrial pathways for establishing a database of mitochondrial physiology.	LEAK ROUTINE OXPHOS ET	F N S Gp CIV NS Other combinations ROX	Permeabilized cells Homogenate Isolated mitochondria	Human Mouse	Heart Nervous system Blood cells HEK Platelet
Doerrier 2018 ESCI2018		High-resolution respirometry, two techniques combined in one to explore mitochondrial function in health and disease	LEAK ROUTINE OXPHOS ET	F N S Gp ROX CIV	Permeabilized cells Permeabilized tissue Homogenate Isolated mitochondria	Human Mouse	Heart Skeletal muscle Nervous system Blood cells HEK
Doerrier 2018 Methods Mol Biol	2018	Doerrier C, Garcia-Souza LF, Krumschnabel G, Wohlfarter Y, Mészáros AT, Gnaiger E (2018) High-Resolution FluoRespirometry and OXPHOS protocols for human cells, permeabilized fibers from small biopsies of muscle, and isolated mitochondria. Methods Mol Biol 1782:31-70. https://doi.org/10.1007/978-1-4939-7831-1_3	LEAK ROUTINE OXPHOS ET	F N S Gp CIV NS Other combinations ROX	Permeabilized cells Permeabilized tissue Homogenate Isolated mitochondria Intact cells	Human Mouse Rat Saccharomyces cerevisiae	Heart Skeletal muscle Endothelial;epithelial;mesothelial cell Blood cells HEK Platelet
Doerrier 2018 MiP2018a		Inter-laboratory harmonization of protocols for mitochondrial function evaluation in permeabilized muscle fibers.	LEAK OXPHOS ET	N S NS ROX	Permeabilized tissue	Mouse	Skeletal muscle
Doerrier 2018 MiP2018c		Inter-laboratory study on human permeabilized myofibers: effects of fiber preparation, respiration buffer, and blebbistatin on mitochondrial respiratory capacity and oxygen limitation.	LEAK OXPHOS ET	N S NS ROX	Permeabilized tissue	Human	Skeletal muscle
Doerrier 2019 MiP2019		Inter-laboratory harmonization of respiratory protocols in permeabilized human muscle fibers.	LEAK ET	N S NS ROX	Permeabilized tissue	Human	Skeletal muscle
Doerrier 2019 MitoFit Preprint Arch EA	2019	Doerrier C, Gama-Perez P, Distefano G, Pesta D, Soendergaard SD, Chroeis KM, Gonzalez-Franquesa A, Goodpaster BH, Coen P, Larsen S, Gnaiger E, Garcia-Roves PM (2019) Inter-laboratory harmonization of respiratory protocols in permeabilized human muscle fibers. https://doi.org/10.26124/mitofit:ea19.MiPSchool.0009	LEAK OXPHOS ET	N S NS ROX	Permeabilized tissue	Human	Skeletal muscle
Doerrier 2020 PaduaMuscleDays Poster		Doerrier C, Gama-Perez P, Chabi B, Ost M, Distefano G, Pesta D, Dahdah N, Lemieux H, Holody C, Carpenter RG, Tepp K, Puurand M, Kaambre T, Dubouchaud H, Cortade F, Calabria E, Casado M, Fernandez-Ortiz M, Acuna-Castroviejo D, Villena JA, Grefte S, Keijer J, O'Brien K, Sowton A, Murray AJ, Campbell MD, Marcinek DJ, Nollet E, Wuest R, Dayanidhi S, Soendergaard SD, Chroeis KM, Gonzalez-Franquesa A, Goodpaster BH, Coen PM, Larsen S, Gnaiger E, Garcia-Roves PM (2020) Commitment to reproducibility in mitochondrial respiration studies with permeabilized muscle fibers. PaduaMuscleDays.	LEAK OXPHOS ET	N S NS ROX	Permeabilized tissue	Human Mouse	Skeletal muscle
Doerrier 2022 MitoFit NADH		Doerrier C, Cardoso LHD, Gnaiger E (2022) Simultaneous measurement of oxygen consumption and NAD(P)H/NAD(P)⁺-redox state in isolated mitochondria. (in prep)	LEAK OXPHOS ET	N	Isolated mitochondria	Mouse	Liver
Dogan 2014 Cell Metab	2014	Dogan SA, Pujol C, Maiti P, Kukat A, Wang S, Hermans S, Senft K, Wibom R, Rugarli EI, Trifunovic A (2014) Tissue-specific loss of DARS2 activates stress responses independently of respiratory chain deficiency in the heart. Cell Metab 19:458-69.	LEAK OXPHOS ET	N S	Permeabilized tissue Isolated mitochondria	Mouse	Heart Skeletal muscle Liver
Dohlmann 2014 Abstract MiP2014		Mitochondrial adaptations to high-intensity training in young and elderly men and women.	OXPHOS ET		Permeabilized cells	Human	Skeletal muscle HeLa Fibroblast
Dohlmann 2018 Physiol Rep	2018	Dohlmann TL, Hindsø M, Dela F, Helge JW, Larsen S (2018) High-intensity interval training changes mitochondrial respiratory capacity differently in adipose tissue and skeletal muscle. Physiol Rep 6:e13857.	OXPHOS ET	N NS	Permeabilized tissue	Human	Skeletal muscle Fat
Doig 2019 bioRxiv	2019	Doig CD, Zelinska AE, Oakey LA, Fletcher RS, El Hassan Y, Garten A, Cartwright D, Heising S, Tennant DA, Watson D, Adamski J, Lavery GG (2019) Induction of the nicotinamide riboside kinase NAD+ salvage pathway in skeletal muscle of H6PDH KO mice. bioRxiv doi: https://doi.org/10.1101/567297 .	LEAK OXPHOS ET	F N S NS ROX	Permeabilized tissue	Mouse	Skeletal muscle
Doig 2020 Skelet Muscle	2020	Doig CL, Zielinska AE, Fletcher RS, Oakey LA, Elhassan YS, Garten A, Cartwright D, Heising S, Alsheri A, Watson DG, Prehn C, Adamski J, Tennant DA, Lavery GG (2020) Induction of the nicotinamide riboside kinase NAD⁺ salvage pathway in a model of sarcoplasmic reticulum dysfunction. Skelet Muscle 10:5.	LEAK OXPHOS ET	F N S NS ROX	Permeabilized tissue	Mouse	Skeletal muscle
Dollerup 2019 J Physiol	2019	Dollerup OL, Chubanava S, Agerholm M, Søndergård SD, Altıntaş A, Møller AB, Høyer KF, Ringgaard S, Stødkilde-Jørgensen H, Lavery GG, Barres R, Larsen S, Prats C, Jessen N, Treebak JT (2019) Nicotinamide riboside does not alter mitochondrial respiration, content or morphology in skeletal muscle from obese and insulin resistant men. J Physiol 598:731-54.	LEAK OXPHOS ET	N S CIV NS ROX	Permeabilized tissue	Human	Skeletal muscle
Dominguez-Amorocho 2019 MiP2019		Role of Sirtuin 1/3 in CD4⁺ T cells activation and differentiation in obese and transplanted animals.	LEAK ET OXPHOS	ROX		Mouse	Lymphocyte
Dong 2024 Nat Commun	2024	Dong J, Chen L, Ye F, Tang J, Liu B, Lin J, Zhou PH, Lu B, Wu M, Lu JH, He JJ, Engelender S, Meng Q, Song Z, He H (2024) Mic19 depletion impairs endoplasmic reticulum-mitochondrial contacts and mitochondrial lipid metabolism and triggers liver disease. https://doi.org/10.1038/s41467-023-44057-6	LEAK OXPHOS ET	N S CIV NS	Homogenate	Mouse	Liver
Donnarumma 2022 Nat Commun	2022	Donnarumma E, Kohlhaas M, Vimont E, Kornobis E, Chaze T, Gianetto QG, Matondo M, Moya-Nilges M, Maack C, Wai T (2022) Mitochondrial Fission Process 1 controls inner membrane integrity and protects against heart failure. https://doi.org/10.1038/s41467-022-34316-3	LEAK OXPHOS ET	F N S CIV	Isolated mitochondria	Mouse	Heart
Donnelly 2024 Redox Biol	2024	Donnelly C, Komlódi T, Cecatto C, Cardoso LHD, Compagnion A-C, Matera A, Tavernari D, Campiche O, Paolicelli RC, Zanou N, Kayser B, Gnaiger E, Place N (2024) Functional hypoxia reduces mitochondrial calcium uptake. Redox Biol 71:103037. https://doi.org/10.1016/j.redox.2024.103037	LEAK OXPHOS ET	N S NS ROX	Intact organism Isolated mitochondria Intact cells	Human Mouse	Heart Skeletal muscle