Difference between revisions of "SUIT-018"
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|info='''A''' [[File:PDF.jpg|100px|link=http://wiki.oroboros.at/images/6/64/SUIT-018.pdf|Bioblast pdf]] Β»[http://wiki.oroboros.at/index.php/File:SUIT-018.pdf Versions] | |info='''A''' [[File:PDF.jpg|100px|link=http://wiki.oroboros.at/images/6/64/SUIT-018.pdf|Bioblast pdf]] Β»[http://wiki.oroboros.at/index.php/File:SUIT-018.pdf Versions] | ||
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{{MitoPedia concepts | |||
|mitopedia concept=MiP concept, SUIT protocol, SUIT A, Recommended | |||
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{{MitoPedia methods | |||
|mitopedia method=Fluorometry | |||
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{{MitoPedia O2k and high-resolution respirometry}} | |||
{{MitoPedia topics}} | |||
::: '''[[Categories of SUIT protocols |SUIT-category]]:'''NS(GM) | ::: '''[[Categories of SUIT protocols |SUIT-category]]:'''NS(GM) | ||
::: '''[[SUIT protocol pattern]]:''' linear 1GMS;2D;- | ::: '''[[SUIT protocol pattern]]:''' linear 1GMS;2D;- | ||
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== Compare SUIT protocols == | == Compare SUIT protocols == | ||
Revision as of 18:14, 24 January 2019
Description
Abbreviation: NS(GM)
Reference: A Β»Versions
MitoPedia concepts:
MiP concept,
SUIT protocol,
SUIT A,
Recommended
MitoPedia methods:
Fluorometry
- SUIT-category:NS(GM)
- SUIT protocol pattern: linear 1GMS;2D;-
DLP applications
- SUIT-018 AmR mt D031 simultaneous determination of O2 and H2O2 flux on isolated mitochondria and tissue homogenate.
References
Year | Reference | Organism | Tissue;cell | |
---|---|---|---|---|
MiPNet24.10 H2O2 flux analysis | 2021-10-22 | Hydrogen peroxide flux analysis using Amplex UltraRed assay in MiR05-Kit with DatLab 7.4 | ||
Komlodi 2021 BEC AmR-O2 | 2021 | KomlΓ³di T, Sobotka O, Gnaiger E (2021) Facts and artefacts on the oxygen dependence of hydrogen peroxide production using Amplex UltraRed. Bioenerg Commun 2021.4. https://doi.org/10.26124/bec:2021-0004 | Saccharomyces cerevisiae | Other cell lines |
MiPNet20.14 AmplexRed H2O2-production | 2019-06-24 | O2k-FluoRespirometry: HRR and simultaneous determination of H2O2 production with Amplex UltraRed. | Mouse | Heart |
Komlodi 2018 Methods Mol Biol | 2018 | Komlodi T, Sobotka O, Krumschnabel G, Bezuidenhout N, Hiller E, Doerrier C, Gnaiger E (2018) Comparison of mitochondrial incubation media for measurement of respiration and hydrogen peroxide production. Methods Mol Biol 1782:137-55. | Human Mouse | Skeletal muscle HEK |
Makrecka-Kuka 2015 Biomolecules | 2015 | Makrecka-Kuka M, Krumschnabel G, Gnaiger E (2015) High-resolution respirometry for simultaneous measurement of oxygen and hydrogen peroxide fluxes in permeabilized cells, tissue homogenate and isolated mitochondria. https://doi.org/10.3390/biom5031319 | Human Mouse | Heart Nervous system HEK |
Krumschnabel 2015 Methods Mol Biol | 2015 | Krumschnabel G, Fontana-Ayoub M, Sumbalova Z, Heidler J, Gauper K, Fasching M, Gnaiger E (2015) Simultaneous high-resolution measurement of mitochondrial respiration and hydrogen peroxide production. Methods Mol Biol 1264:245-61. | Mouse | Nervous system |
Steps and respiratory states
Step | State | Pathway | Q-junction | Comment - Events (E) and Marks (M) |
---|---|---|---|---|
0DTPA |
| |||
0SOD |
| |||
0HRP |
| |||
0AmR |
|
Step | State | Pathway | Q-junction | Comment - Events (E) and Marks (M) |
---|---|---|---|---|
1GMS | GMSL(n) | NS | CI&CII | 1GMS
|
2D | GMSP | NS | CI&CII | 1GMS;2D
|
3Ama | ROX | 1GMS;2D;3Ama
|
Strengths and limitations
- + Reasonable duration of the experiment.
- + Simple protocol to evaluate the oxygen dependence of H2O2 production.
- - Measurements with Amplex UltraRed assay cannot be carried out with liver homogenate.
- - H2O2 production can be studied in two different states, LEAK and OXPHOS.
- - Reoxygenation and nitrogen injection could lead to bubble formation in the O2k-Chamber